- Total episodes: 43
- 12 Top 5 segments and the debut of Versus
- The podcast becomes Film Junk
- Original co-host Chian makes his final appearance
- First episode for Greg
- New Spin-Off: Fishing With Tom
- Goon was a guest on 11 episodes
- Thomas Baychuck was a guest on 3 episodes
- Roman was a guest on 2 episodes
- Alicia, Nuno and Zak were guests on 1 episode
|056||March 6, 2006||Dave Chappelle's Block Party||Very first 'Film Junk'
Fishing With Tom is announced
|057||March 12, 2006||The Hills Have Eyes||Guests: Roman, Thomas Baychuck|
|058||March 19, 2006||V For Vendetta||Guest: Nuno|
|059||March 26, 2006||Inside Man|
|060||April 3, 2006||Slither|
|061||April 9, 2006||The Staircase||Guest: Thomas Baychuck|
|062||April 16, 2006||The Films of John Carpenter||Guest: Goon|
|063||April 23, 2006||Silent Hill|
|064||May 1, 2006||United 93||Guest: Goon|
|065||May 8, 2006||Mission Impossible III|
|066||May 16, 2006||Poseidon||Guest: Goon|
|067||May 23, 2006||No featured review||Jay hosts as Sean is away on his honeymoon.
Guest: Thomas Baychuck
|068||May 29, 2006||X-Men: The Last Stand||Guest: Goon|
|069||June 4, 2006||The Break Up||Guest: Roman|
|070||June 12, 2006||Cars|
|071||June 19, 2006||Nacho Libre||Guest: Goon|
|072||June 26, 2006||An Inconvenient Truth / Sarah Silverman's Jesus is Magic||Guest: Goon|
|073||July 2, 2006||Superman Returns|
|074||July 9, 2006||Pirates of the Caribbean: Dead Man's Chest|
|075||July 17, 2006||District B13||Jay has a rash.|
|076||July 23, 2006||Lady in the Water / Clerks II||Jay screens Cannibal Holocaust at SK.
Chian's last episode as a regular.
|077||July 31, 2006||Miami Vice / Sympathy for Lady Vengeance||Talk of the podcast being "too long" (lol).|
|078||August 7, 2006||Talladega Nights: The Ballad of Ricky Bobby / The Descent / Monster House||Greg's first show.|
|079||August 13, 2006||World Trade Center / Brick|
|080||August 20, 2006||Snakes on a Plane||Talk of changing the theme song.
|081||August 27, 2006||Little Miss Sunshine||Fall TV Preview 2
|082||September 4, 2006||Toronto Fan Expo Recap||Recapping a trip to the Drive-In|
|083||September 12, 2006||Lonesome Jim||Greg away at TIFF.
|084||September 18, 2006||Rescue Dawn||TIFF recap.|
|085||September 24, 2006||Jackass Number Two||Top 5: Movies that were better when you were a kid.|
|086||October 2, 2006||The Science of Sleep||Top 5: Most controversial movies|
|087||October 10, 2006||The Departed||Jay talks about calling in to Tom Green Live and asking Todd Phillips a question.
Top 5: Memorable movie deaths
|088||October 15, 2006||The Texas Chainsaw Massacre: The Beginning||The episode is incorrectly called episode #87. As a result, the rest of the episodes for 2006 are one number off. They get back on track with episode #99.
Top 5: Horror movie sequels
Greg is away.
|089||October 23, 2006||Marie Antoinette||Hosts "Jay Magnus" and "Sean Fairchild".
Top 5: Worst horror movie sequels
Greg is away.
|090||October 30, 2006||No featured review||Top 10 Comedic Horror Films.
Greg is away.
|091||November 6, 2006||Borat||Jay goes on a rant talking about trying to see Borat.
|092||November 12, 2006||No featured review||Jay buys a "High Density" Video Player.
Top 5: Weirdest Celebrities.
|093||November 19, 2006||Casino Royale (2006)||Top 5: Inspirational nerd movies.
|094||November 27, 2006||For Your Consideration||The guys talk about the Michael Richards controversy.
Top 5: Worst celebrity P.R. blunders.
|095||December 4, 2006||No featured review||Top 5: 'So Bad There Good' Movies. Greg is away.|
|096||December 10, 2006||Superman II: The Richard Donner Cut||Top 5: Mindfuck movies. Greg is away.|
|097||December 18, 2006||Jesus Camp||This is the last episode to use the original Film Junk
Top 5: Action movie franchises.
|098||December 24, 2006||Rocky Balboa||1st show to be broadcast live on TalkShoe
Top 5: Movies that could ruin a family Christmas celebration.
Versus: Schwarzenegger vs. Stallone.